QuickFile doesn’t record any cheques that haven’t been credited or debited to/from your account, and links only to the tagged bank transaction. Do you have a cheque holding account set up on your account at all? I’m just trying to understand how you record cheques in order for you to show just the outstanding ones, which I’m assuming are the ones yet to clear - although please correct me if I’m wrong.
But to answer your question of “How to bank reconcile”, there’s a guide in our Knowledgebase that may help: