Hi John,
If you use the ‘Salary or partner drawings’ option you’ll be given two choices - Employee Salary (PAYE) or Partner Drawings. If you have employees you are tagging their pay, then this is the correct option to use.
If you are tagging your own drawings (e.g. that of the sole trader), then you can either use this option or the bank transfer option as both perform the same action.
The main thing would be to ensure that your journal would be correct at year end to reflect this correctly on your accounts. There’s a post with some more details on the journals here