There is a similar discussion on the link below. At the moment QuickFile assumes all items subject to the reverse charge relate to services not goods. It won’t affect your final VAT calculation, just the statistics boxes on the return, you would however need to manually adjust for reverse charged goods at this time.
http://community.quickfile.co.uk/t/reverse-charge-invoice-on-service-purchase-from-eu-ebay-fees/4651